Two sample MR report


CDC42EP1_Interstitial Macrophages against UKB-b-18436

Date: 13 January, 2026


Results from two sample MR:

method nsnp b se pval
MR Egger 7 -0.1019550 0.1622323 0.5572956
Weighted median 7 0.0246721 0.0089164 0.0056565
Inverse variance weighted 7 0.0226536 0.0069809 0.0011741
Simple mode 7 0.0268992 0.0132408 0.0884755
Weighted mode 7 0.0261374 0.0126965 0.0852179

Heterogeneity tests

method Q Q_df Q_pval
MR Egger 1.357692 5 0.9288847
Inverse variance weighted 1.948745 6 0.9243516

Test for directional horizontal pleiotropy

egger_intercept se pval
0.082055 0.1067314 0.4767374

Test that the exposure is upstream of the outcome

snp_r2.exposure snp_r2.outcome correct_causal_direction steiger_pval
9.38e-05 0 TRUE 0.3588016

Note - R^2 values are approximate


Forest plot of single SNP MR

plot of chunk chunk5


Comparison of results using different MR methods

plot of chunk chunk6


Funnel plot

plot of chunk chunk7


Leave-one-out sensitivity analysis

plot of chunk chunk8